The I.M.A.G.E. Consortium
"Sharing resources to achieve a common goal - the discovery of all genes"
Cow cDNA Libraries
Library information (by tissue)
brain/cns
1. GC_BGC-11
2. GC_BGC-18
3. GC_BGC-19
4. GC_BGC-20
5. GC_BGC-21
6. GC_BGC-22
7. GC_BGC-25
8. GC_BGC-26
9. GC_BGC-27
10. GC_BGC-28
colon
11. GC_BGC-17
heart
12. GC_BGC-12
ileum
13. GC_BGC-02
kidney
14. GC_BGC-34
liver
15. GC_BGC-04
16. GC_BGC-14
lung
17. GC_BGC-23
mammary gland
18. GC_BGC-03
muscle
19. GC_BGC-30
ovary
20. GC_BGC-33
pancreas
21. GC_BGC-24
peyer's patch
22. GC_BGC-01
placenta
23. GC_BGC-32
rumen
24. GC_BGC-35
skin
25. GC_BGC-29
testis
26. GC_BGC-05
thymus
27. GC_BGC-13
uterus
28. GC_BGC-16
NAME: GC_BGC-11
LIB_ID: 2309
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: female
STAGE: juvenile
ORGAN: brain/CNS
TISSUE: hypothalamus
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >400 bp with average size 1.4 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-18
LIB_ID: 2360
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: fetal
ORGAN: brain/CNS
TISSUE: cerebral cortex
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAGAGAGAAGCGGCCGCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.3 kp and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-19
LIB_ID: 2318
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: fetal
ORGAN: brain/CNS
TISSUE: pons
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.5 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-20
LIB_ID: 2319
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: fetal
ORGAN: brain/CNS
TISSUE: medulla
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.3 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-21
LIB_ID: 2361
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: fetal
ORGAN: brain/CNS
TISSUE: spinal column
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAGAGAGAAGCGGCCGCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.3 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-22
LIB_ID: 2320
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: fetal
ORGAN: brain/CNS
TISSUE: cerebellum
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.4 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-25
LIB_ID: 2338
ORGANISM: Bos taurus
STRAIN: L1 Hereford
SEX: female
STAGE: juvenile
ORGAN: brain/CNS
TISSUE: hippocampus
HOST: DH10B TonA
VECTOR: pExpress-1
V_TYPE: plasmid
RE_5': EcoRV
RE_3': NotI
DESCR: cDNA was primed using oligo-dT primer: 5'-pGACTAGTTCTAGATCGCGAGCGGCCGCCC(T)25-3' and cloned into the EcoRV/NotI sites of pExpress-1. Size-selection 1.4 kb resulted in an average insert size of 2 kb. This non-normalized primary library was constructed by Express Genomics (Frederick, MD) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-26
LIB_ID: 2339
ORGANISM: Bos taurus
STRAIN: L1 Hereford
SEX: female
STAGE: juvenile
ORGAN: brain/CNS
TISSUE: thalamus
HOST: DH10B TonA
VECTOR: pExpress-1
V_TYPE: plasmid
RE_5': EcoRV
RE_3': NotI
DESCR: cDNA was primed using oligo-dT primer: 5'-pGACTAGTTCTAGATCGCGAGCGGCCGCCC(T)25-3' and cloned into the EcoRV/NotI sites of pExpress-1. Size-selection 1.4 kb resulted in an average insert size of 2.2 kb. This non-normalized primary library was constructed by Express Genomics (Frederick, MD) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-27
LIB_ID: 2340
ORGANISM: Bos taurus
STRAIN: L1 Hereford
SEX: female
STAGE: juvenile
ORGAN: brain/CNS
TISSUE: basal ganglia
HOST: DH10B TonA
VECTOR: pExpress-1
V_TYPE: plasmid
RE_5': EcoRV
RE_3': NotI
DESCR: cDNA was primed using oligo-dT primer: 5'-pGACTAGTTCTAGATCGCGAGCGGCCGCCC(T)25-3' and cloned into the EcoRV/NotI sites of pExpress-1. Size-selection 1.4 kb resulted in an average insert size of 1.8 kb. This non-normalized primary library was constructed by Express Genomics (Frederick, MD) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-28
LIB_ID: 2341
ORGANISM: Bos taurus
STRAIN: L1 Hereford
SEX: female
STAGE: juvenile
ORGAN: brain/CNS
TISSUE: cerebral cortex
HOST: DH10B TonA
VECTOR: pExpress-1
V_TYPE: plasmid
RE_5': EcoRV
RE_3': NotI
DESCR: cDNA was primed using oligo-dT primer: 5'-pGACTAGTTCTAGATCGCGAGCGGCCGCCC(T)25-3' and cloned into the EcoRV/NotI sites of pExpress-1. Size-selection 1.4 kb resulted in an average insert size of 1.9 kb. This non-normalized primary library was constructed by Express Genomics (Frederick, MD) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-17
LIB_ID: 2314
ORGANISM: Bos taurus
STRAIN: L1 Hereford
SEX: male
STAGE: fetal
ORGAN: colon
TISSUE: ascending colon
HOST: DH10B TonA
VECTOR: pExpress-1
V_TYPE: plasmid
RE_5': EcoRV
RE_3': NotI
DESCR: cDNA was primed using oligo-dT primer: 5'-pGACTAGTTCTAGATCGCGAGCGGCCGCCC(T)25-3' and cloned into the EcoRV/NotI sites of pExpress-1. Size-selection 1.4kb resulted in an average insert size of 2.3kb. This is a non-normalized primary library and was constructed by Express Genomics (Frederick, MD). Note: this is a
Xenopus Gene Collection library.
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NAME: GC_BGC-12
LIB_ID: 2311
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: female
STAGE: juvenile
ORGAN: heart
TISSUE: ventricle
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >400bp with average size 1.4 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-02
LIB_ID: 2256
ORGANISM: Bos taurus
STRAIN: Crossbred x Angus
SEX: female
STAGE: juvenile
ORGAN: ileum
HOST: XL10 Gold
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >300 bp with average size 1120 bp and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-34
LIB_ID: 2410
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: female
STAGE: juvenile
ORGAN: kidney
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAGAGAGAAGCGGCCGCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.1kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-04
LIB_ID: 2304
ORGANISM: Bos taurus
STRAIN: Crossbred x Angus
SEX: female
STAGE: juvenile
ORGAN: liver
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >400 bp with average size 1 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-14
LIB_ID: 2312
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: fetal
ORGAN: liver
TISSUE: liver
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >400 bp with average size 1.8 bp and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-23
LIB_ID: 2321
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: fetal
ORGAN: lung
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-03
LIB_ID: 2259
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: female
STAGE: adult
AGE: 4
ORGAN: mammary gland
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >400 bp with average size 1300 bp and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-30
LIB_ID: 2343
ORGANISM: Bos taurus
STRAIN: L1 Hereford
SEX: male
STAGE: fetal
ORGAN: muscle
HOST: DH10B TonA
VECTOR: pExpress-1
V_TYPE: plasmid
RE_5': EcoRV
RE_3': NotI
DESCR: cDNA was primed using oligo-dT primer: 5'-pGACTAGTTCTAGATCGCGAGCGGCCGCCC(T)25-3' and cloned into the EcoRV/NotI sites of pExpress-1. Size-selection 1.4 kb resulted in an average insert size of 2.2 kb. This non-normalized primary library was constructed by Express Genomics (Frederick, MD) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-33
LIB_ID: 2382
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: female
STAGE: juvenile
ORGAN: ovary
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAGAGAGAAGCGGCCGCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.2 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-24
LIB_ID: 2381
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: fetal
ORGAN: pancreas
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAGAGAGAAGCGGCCGCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.1 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-01
LIB_ID: 2221
ORGANISM: Bos taurus
STRAIN: Crossbred x Angus
SEX: female
STAGE: juvenile
ORGAN: Peyer's patch
HOST: DH10B TonA
VECTOR: pBluescript II SK+
V_TYPE: phagemid
RE_5': XhoI
RE_3': BamHI
DESCR: Library is oligo-dT primed using BamHI primer 5'-GAGAGAGAGAAAGGATCCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using XhoI primer 5'-GAGAGAGAGAGAGATTCTTCGAGTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pBluescript II SK+ vector. Library is size selected >400 bp with average size 890 bp and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (3') and M13F (5'). Library constructed by J. Yu and S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-32
LIB_ID: 2375
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: neither
STAGE: placental
ORGAN: placenta
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAGAGAGAAGCGGCCGCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.5 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-35
LIB_ID: 2411
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: female
STAGE: juvenile
ORGAN: Rumen
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAGAGAGAAGCGGCCGCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >500 bp with average size 1.1kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-29
LIB_ID: 2342
ORGANISM: Bos taurus
STRAIN: L1 Hereford
SEX: male
STAGE: fetal
ORGAN: skin
HOST: DH10B TonA
VECTOR: pExpress-1
V_TYPE: plasmid
RE_5': EcoRV
RE_3': NotI
DESCR: cDNA was primed using oligo-dT primer: 5'-pGACTAGTTCTAGATCGCGAGCGGCCGCCC(T)25-3' and cloned into the EcoRV/NotI sites of pExpress-1. Size-selection 1.4 kb resulted in an average insert size of 2.3 kb. This non-normalized primary library was constructed by Express Genomics (Frederick, MD) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-05
LIB_ID: 2305
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: male
STAGE: adult
AGE: 7
ORGAN: testis
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >400 bp with average size 1.1 kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-13
LIB_ID: 2310
ORGANISM: Bos taurus
STRAIN: Hereford
SEX: female
STAGE: juvenile
ORGAN: thymus
HOST: DH10B TonA
VECTOR: pCMV-SPORT6
V_TYPE: phagemid
RE_5': SalI
RE_3': NotI
DESCR: Library is oligo-dT primed using 5'-GAGAGAGAGAAAGCGGCCGCAAGAGCTCTTTTTTTTTTTTTTTTVN-3'. Cap structure is biotinylated and Cap Trapper approach is used to select putative full-length cDNA. cDNA is subjected to oligo-dG tailing followed by second-strand synthesis using 5'-GAGAGAGAGAGAGATTGTCGACTTAATTAAATTAATCCCCCCCCCCCCC-3'. After restriction digest, cDNA is directionally cloned into pCMV-SPORT6 vector. Library is size selected >400bp with average size 1.5kb and is amplified once. Reference for library construction method: Methods in Enzymology 303:19-45. Sequencing primers: M13R (5') and M13F (3'). Library constructed in the laboratory of S. Moore (University of Alberta, Canada) for the Bovine Genome Sequencing Program.
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NAME: GC_BGC-16
LIB_ID: 2313
ORGANISM: Bos taurus
STRAIN: L1 Hereford
SEX: female
STAGE: adult
ORGAN: uterus
HOST: DH10B TonA
VECTOR: pExpress-1
V_TYPE: plasmid
RE_5': EcoRV
RE_3': NotI
DESCR: cDNA was primed using oligo-dT primer: 5'-pGACTAGTTCTAGATCGCGAGCGGCCGCCC(T)25-3' and cloned into the EcoRV/NotI sites of pExpress-1. Size-selection 1.4kb resulted in an average insert size of 2.4kb. This is a non-normalized library and was constructed by Express Genomics (Frederick, MD). Note: this is a
Xenopus Gene Collection library.
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